Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav4d-3A0A075B625 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4d-3A0A075B625 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4d-3A0A075B625 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4d-3A0A075B625 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4d-3A0A075B625 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4d-3A0A075B625 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4d-3A0A075B625 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
Trav4d-3A0A075B625 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav4d-3A0A075B625 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4d-3A0A075B625 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4d-3A0A075B625 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4d-3A0A075B625 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4d-3A0A075B625 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4d-3A0A075B625 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav4d-3A0A075B625 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4d-3A0A075B625 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4d-3A0A075B625 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4d-3A0A075B625 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav4d-3A0A075B625 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Trav4d-3A0A075B625 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.42■□□□□ 0.22
Trav4d-3A0A075B625 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4d-3A0A075B625 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4d-3A0A075B625 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4d-3A0A075B625 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav4d-3A0A075B625 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.4■□□□□ 0.22
Trav4d-3A0A075B625 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.39■□□□□ 0.22
Trav4d-3A0A075B625 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.39■□□□□ 0.21
Trav4d-3A0A075B625 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav4d-3A0A075B625 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4d-3A0A075B625 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4d-3A0A075B625 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4d-3A0A075B625 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4d-3A0A075B625 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav4d-3A0A075B625 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4d-3A0A075B625 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4d-3A0A075B625 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4d-3A0A075B625 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav4d-3A0A075B625 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4d-3A0A075B625 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4d-3A0A075B625 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav4d-3A0A075B625 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trav4d-3A0A075B625 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
Trav4d-3A0A075B625 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Trav4d-3A0A075B625 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav4d-3A0A075B625 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4d-3A0A075B625 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4d-3A0A075B625 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav4d-3A0A075B625 Rab21-202ENSMUST00000218831 843 ntBASIC16.36■□□□□ 0.21
Trav4d-3A0A075B625 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Trav4d-3A0A075B625 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav4d-3A0A075B625 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4d-3A0A075B625 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav4d-3A0A075B625 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav4d-3A0A075B625 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4d-3A0A075B625 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.34■□□□□ 0.21
Trav4d-3A0A075B625 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4d-3A0A075B625 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
Trav4d-3A0A075B625 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav4d-3A0A075B625 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav4d-3A0A075B625 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav4d-3A0A075B625 Gm25238-201ENSMUST00000174914 89 ntBASIC16.33■□□□□ 0.2
Trav4d-3A0A075B625 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.33■□□□□ 0.2
Trav4d-3A0A075B625 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4d-3A0A075B625 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4d-3A0A075B625 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4d-3A0A075B625 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav4d-3A0A075B625 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC16.32■□□□□ 0.2
Trav4d-3A0A075B625 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav4d-3A0A075B625 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4d-3A0A075B625 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav4d-3A0A075B625 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4d-3A0A075B625 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4d-3A0A075B625 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4d-3A0A075B625 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4d-3A0A075B625 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav4d-3A0A075B625 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4d-3A0A075B625 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4d-3A0A075B625 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav4d-3A0A075B625 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4d-3A0A075B625 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4d-3A0A075B625 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav4d-3A0A075B625 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav4d-3A0A075B625 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav4d-3A0A075B625 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4d-3A0A075B625 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav4d-3A0A075B625 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4d-3A0A075B625 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav4d-3A0A075B625 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4d-3A0A075B625 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav4d-3A0A075B625 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.25■□□□□ 0.19
Trav4d-3A0A075B625 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Trav4d-3A0A075B625 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4d-3A0A075B625 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4d-3A0A075B625 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav4d-3A0A075B625 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4d-3A0A075B625 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4d-3A0A075B625 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav4d-3A0A075B625 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Trav4d-3A0A075B625 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms