Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smco4Q9JIS3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Smco4Q9JIS3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Smco4Q9JIS3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Smco4Q9JIS3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smco4Q9JIS3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smco4Q9JIS3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.36□□□□□ -0.11
Smco4Q9JIS3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco4Q9JIS3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smco4Q9JIS3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smco4Q9JIS3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smco4Q9JIS3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smco4Q9JIS3 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.36□□□□□ -0.11
Smco4Q9JIS3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms