Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Rsph3bQ9DA80 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.52■□□□□ 0.71
Rsph3bQ9DA80 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rsph3bQ9DA80 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Mir2861-201ENSMUST00000175539 82 ntBASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Gm7977-201ENSMUST00000193787 748 ntBASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rsph3bQ9DA80 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rsph3bQ9DA80 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Gm30025-201ENSMUST00000218555 728 ntBASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Timm23-208ENSMUST00000226683 750 ntBASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Gm9987-201ENSMUST00000069768 567 ntBASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rsph3bQ9DA80 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Gm21814-202ENSMUST00000203277 873 ntBASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rsph3bQ9DA80 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Gm43799-201ENSMUST00000201845 579 ntBASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rsph3bQ9DA80 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rsph3bQ9DA80 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms