Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Gm44549-201ENSMUST00000208351 577 ntBASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Rab3c-203ENSMUST00000224180 967 ntBASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Brf2Q3UAW9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.78■□□□□ 0.28
Brf2Q3UAW9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brf2Q3UAW9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brf2Q3UAW9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brf2Q3UAW9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brf2Q3UAW9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Brf2Q3UAW9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.77■□□□□ 0.28
Brf2Q3UAW9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.77■□□□□ 0.28
Brf2Q3UAW9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brf2Q3UAW9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brf2Q3UAW9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Brf2Q3UAW9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Brf2Q3UAW9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Brf2Q3UAW9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Brf2Q3UAW9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Brf2Q3UAW9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Brf2Q3UAW9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Gm5408-201ENSMUST00000197998 747 ntBASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf2Q3UAW9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf2Q3UAW9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf2Q3UAW9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Brf2Q3UAW9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf2Q3UAW9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf2Q3UAW9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Brf2Q3UAW9 Gm38285-201ENSMUST00000192928 922 ntBASIC16.75■□□□□ 0.27
Brf2Q3UAW9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.75■□□□□ 0.27
Brf2Q3UAW9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.75■□□□□ 0.27
Brf2Q3UAW9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Brf2Q3UAW9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.75■□□□□ 0.27
Brf2Q3UAW9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf2Q3UAW9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf2Q3UAW9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Brf2Q3UAW9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms