Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Thumpd3P97770 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd3P97770 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd3P97770 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.12■□□□□ 0.49
Thumpd3P97770 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.12■□□□□ 0.49
Thumpd3P97770 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.12■□□□□ 0.49
Thumpd3P97770 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd3P97770 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd3P97770 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd3P97770 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd3P97770 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Thumpd3P97770 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd3P97770 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Thumpd3P97770 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Thumpd3P97770 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd3P97770 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
Thumpd3P97770 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Thumpd3P97770 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd3P97770 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd3P97770 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Thumpd3P97770 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.11■□□□□ 0.49
Thumpd3P97770 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thumpd3P97770 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thumpd3P97770 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thumpd3P97770 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Thumpd3P97770 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Thumpd3P97770 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.11■□□□□ 0.49
Thumpd3P97770 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.11■□□□□ 0.49
Thumpd3P97770 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Thumpd3P97770 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.11■□□□□ 0.49
Thumpd3P97770 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thumpd3P97770 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thumpd3P97770 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Thumpd3P97770 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.1■□□□□ 0.49
Thumpd3P97770 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd3P97770 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd3P97770 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.1■□□□□ 0.49
Thumpd3P97770 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd3P97770 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd3P97770 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd3P97770 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd3P97770 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd3P97770 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.1■□□□□ 0.49
Thumpd3P97770 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd3P97770 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Thumpd3P97770 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd3P97770 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Thumpd3P97770 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.1■□□□□ 0.49
Thumpd3P97770 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.1■□□□□ 0.49
Thumpd3P97770 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd3P97770 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Thumpd3P97770 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd3P97770 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.09■□□□□ 0.49
Thumpd3P97770 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd3P97770 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd3P97770 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd3P97770 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Thumpd3P97770 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.09■□□□□ 0.49
Thumpd3P97770 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd3P97770 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.09■□□□□ 0.49
Thumpd3P97770 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd3P97770 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd3P97770 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Thumpd3P97770 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.09■□□□□ 0.49
Thumpd3P97770 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Thumpd3P97770 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd3P97770 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd3P97770 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd3P97770 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Thumpd3P97770 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Thumpd3P97770 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd3P97770 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd3P97770 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd3P97770 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd3P97770 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.08■□□□□ 0.49
Thumpd3P97770 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd3P97770 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.08■□□□□ 0.49
Thumpd3P97770 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd3P97770 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd3P97770 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd3P97770 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Thumpd3P97770 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd3P97770 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd3P97770 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Thumpd3P97770 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Thumpd3P97770 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.08■□□□□ 0.48
Thumpd3P97770 Gm6420-201ENSMUST00000193885 723 ntBASIC18.08■□□□□ 0.48
Thumpd3P97770 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Thumpd3P97770 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Thumpd3P97770 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Thumpd3P97770 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Thumpd3P97770 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Thumpd3P97770 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd3P97770 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd3P97770 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd3P97770 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd3P97770 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd3P97770 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd3P97770 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.07■□□□□ 0.48
Thumpd3P97770 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 151.3 ms