Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cacna1aP97445 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cacna1aP97445 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1aP97445 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cacna1aP97445 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cacna1aP97445 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1aP97445 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1aP97445 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1aP97445 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.42■□□□□ 0.22
Cacna1aP97445 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cacna1aP97445 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1aP97445 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cacna1aP97445 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1aP97445 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1aP97445 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1aP97445 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1aP97445 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.41■□□□□ 0.22
Cacna1aP97445 Gm22697-201ENSMUST00000175194 63 ntBASIC16.41■□□□□ 0.22
Cacna1aP97445 Gm2274-201ENSMUST00000184539 609 ntBASIC16.41■□□□□ 0.22
Cacna1aP97445 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1aP97445 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1aP97445 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.41■□□□□ 0.22
Cacna1aP97445 Golph3-202ENSMUST00000226517 2359 ntBASIC16.41■□□□□ 0.22
Cacna1aP97445 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.41■□□□□ 0.22
Cacna1aP97445 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Cacna1aP97445 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1aP97445 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1aP97445 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cacna1aP97445 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.4■□□□□ 0.22
Cacna1aP97445 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1aP97445 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cacna1aP97445 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
Cacna1aP97445 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.4■□□□□ 0.22
Cacna1aP97445 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1aP97445 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1aP97445 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.4■□□□□ 0.22
Cacna1aP97445 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1aP97445 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1aP97445 Gm25016-201ENSMUST00000158399 131 ntBASIC16.4■□□□□ 0.22
Cacna1aP97445 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1aP97445 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.4■□□□□ 0.22
Cacna1aP97445 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1aP97445 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cacna1aP97445 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cacna1aP97445 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1aP97445 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cacna1aP97445 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1aP97445 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1aP97445 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1aP97445 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1aP97445 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.39■□□□□ 0.21
Cacna1aP97445 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Cacna1aP97445 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1aP97445 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1aP97445 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.38■□□□□ 0.21
Cacna1aP97445 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1aP97445 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.38■□□□□ 0.21
Cacna1aP97445 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1aP97445 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1aP97445 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1aP97445 Gm16061-201ENSMUST00000122167 857 ntBASIC16.38■□□□□ 0.21
Cacna1aP97445 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.38■□□□□ 0.21
Cacna1aP97445 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.38■□□□□ 0.21
Cacna1aP97445 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1aP97445 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1aP97445 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1aP97445 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1aP97445 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Cacna1aP97445 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1aP97445 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Cacna1aP97445 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1aP97445 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Cacna1aP97445 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.38■□□□□ 0.21
Cacna1aP97445 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1aP97445 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 AW822252-206ENSMUST00000208904 237 ntBASIC16.37■□□□□ 0.21
Cacna1aP97445 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cacna1aP97445 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Cacna1aP97445 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.37■□□□□ 0.21
Cacna1aP97445 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Cacna1aP97445 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.37■□□□□ 0.21
Cacna1aP97445 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.37■□□□□ 0.21
Cacna1aP97445 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.37■□□□□ 0.21
Cacna1aP97445 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.37■□□□□ 0.21
Cacna1aP97445 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1aP97445 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Cacna1aP97445 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1aP97445 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 206 ms