Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.22■□□□□ 0.83
Psmc4P54775 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Psmc4P54775 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Psmc4P54775 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Psmc4P54775 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Psmc4P54775 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Psmc4P54775 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Psmc4P54775 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.21■□□□□ 0.83
Psmc4P54775 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Psmc4P54775 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Psmc4P54775 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Psmc4P54775 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Psmc4P54775 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Psmc4P54775 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Psmc4P54775 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Psmc4P54775 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Psmc4P54775 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Psmc4P54775 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Psmc4P54775 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Psmc4P54775 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Psmc4P54775 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Psmc4P54775 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.2■□□□□ 0.82
Psmc4P54775 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Psmc4P54775 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Psmc4P54775 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Psmc4P54775 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.2■□□□□ 0.82
Psmc4P54775 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Psmc4P54775 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Psmc4P54775 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Psmc4P54775 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.19■□□□□ 0.82
Psmc4P54775 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Psmc4P54775 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Psmc4P54775 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Psmc4P54775 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Psmc4P54775 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Psmc4P54775 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Psmc4P54775 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.19■□□□□ 0.82
Psmc4P54775 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Psmc4P54775 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Psmc4P54775 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Psmc4P54775 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.19■□□□□ 0.82
Psmc4P54775 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Psmc4P54775 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Psmc4P54775 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Psmc4P54775 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.18■□□□□ 0.82
Psmc4P54775 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.18■□□□□ 0.82
Psmc4P54775 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Psmc4P54775 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.18■□□□□ 0.82
Psmc4P54775 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Psmc4P54775 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Psmc4P54775 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Psmc4P54775 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Psmc4P54775 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Psmc4P54775 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Psmc4P54775 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Gm7461-201ENSMUST00000058918 827 ntBASIC20.17■□□□□ 0.82
Psmc4P54775 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.17■□□□□ 0.82
Psmc4P54775 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Psmc4P54775 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Psmc4P54775 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Psmc4P54775 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Psmc4P54775 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.16■□□□□ 0.82
Psmc4P54775 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.16■□□□□ 0.82
Psmc4P54775 Mir2861-201ENSMUST00000175539 82 ntBASIC20.16■□□□□ 0.82
Psmc4P54775 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Psmc4P54775 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Psmc4P54775 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Psmc4P54775 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Psmc4P54775 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Psmc4P54775 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Psmc4P54775 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Psmc4P54775 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Psmc4P54775 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Psmc4P54775 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.15■□□□□ 0.82
Psmc4P54775 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.15■□□□□ 0.82
Psmc4P54775 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Psmc4P54775 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Psmc4P54775 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Psmc4P54775 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Psmc4P54775 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Psmc4P54775 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Psmc4P54775 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.15■□□□□ 0.82
Psmc4P54775 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Psmc4P54775 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Psmc4P54775 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Psmc4P54775 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Psmc4P54775 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Psmc4P54775 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Psmc4P54775 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms