Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
4933424G06RikA0A140LIP3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
4933424G06RikA0A140LIP3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
4933424G06RikA0A140LIP3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.22■□□□□ 0.51
4933424G06RikA0A140LIP3 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.22■□□□□ 0.51
4933424G06RikA0A140LIP3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
4933424G06RikA0A140LIP3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
4933424G06RikA0A140LIP3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
4933424G06RikA0A140LIP3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
4933424G06RikA0A140LIP3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
4933424G06RikA0A140LIP3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Mir2861-201ENSMUST00000175539 82 ntBASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
4933424G06RikA0A140LIP3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
4933424G06RikA0A140LIP3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Timm23-208ENSMUST00000226683 750 ntBASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
4933424G06RikA0A140LIP3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 Gm21814-202ENSMUST00000203277 873 ntBASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
4933424G06RikA0A140LIP3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms