Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smco4Q9JIS3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Smco4Q9JIS3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Smco4Q9JIS3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.45□□□□□ -0.1
Smco4Q9JIS3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.45□□□□□ -0.1
Smco4Q9JIS3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smco4Q9JIS3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smco4Q9JIS3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Smco4Q9JIS3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smco4Q9JIS3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Smco4Q9JIS3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smco4Q9JIS3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smco4Q9JIS3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smco4Q9JIS3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smco4Q9JIS3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smco4Q9JIS3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms