Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Trappc6aQ78XR0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Gm23634-201ENSMUST00000175071 91 ntBASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trappc6aQ78XR0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Mir2861-201ENSMUST00000175539 82 ntBASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Trappc6aQ78XR0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trappc6aQ78XR0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trappc6aQ78XR0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Gm10013-201ENSMUST00000106074 672 ntBASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trappc6aQ78XR0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trappc6aQ78XR0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trappc6aQ78XR0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trappc6aQ78XR0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trappc6aQ78XR0 Mir5130-201ENSMUST00000175160 84 ntBASIC17.69■□□□□ 0.42
Trappc6aQ78XR0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.69■□□□□ 0.42
Trappc6aQ78XR0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trappc6aQ78XR0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trappc6aQ78XR0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trappc6aQ78XR0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trappc6aQ78XR0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Gm2274-201ENSMUST00000184539 609 ntBASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Gm45058-201ENSMUST00000205810 766 ntBASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trappc6aQ78XR0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trappc6aQ78XR0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trappc6aQ78XR0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trappc6aQ78XR0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms