Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Rarb-207ENSMUST00000225921 2756 ntBASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Uspl1Q3ULM6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Uspl1Q3ULM6 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Uspl1Q3ULM6 Gm29791-202ENSMUST00000207888 369 ntBASIC23.16■■□□□ 1.3
Uspl1Q3ULM6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Uspl1Q3ULM6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Uspl1Q3ULM6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Uspl1Q3ULM6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Uspl1Q3ULM6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Uspl1Q3ULM6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC23.16■■□□□ 1.3
Uspl1Q3ULM6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Uspl1Q3ULM6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Uspl1Q3ULM6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Uspl1Q3ULM6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Uspl1Q3ULM6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Uspl1Q3ULM6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Uspl1Q3ULM6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Uspl1Q3ULM6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC23.14■■□□□ 1.29
Uspl1Q3ULM6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Uspl1Q3ULM6 Gm15378-201ENSMUST00000121894 207 ntBASIC23.14■■□□□ 1.29
Uspl1Q3ULM6 Gm43183-201ENSMUST00000200632 547 ntBASIC23.14■■□□□ 1.29
Uspl1Q3ULM6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Uspl1Q3ULM6 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Uspl1Q3ULM6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Uspl1Q3ULM6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
Uspl1Q3ULM6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Uspl1Q3ULM6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Uspl1Q3ULM6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Uspl1Q3ULM6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Uspl1Q3ULM6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Uspl1Q3ULM6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC23.12■■□□□ 1.29
Uspl1Q3ULM6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Uspl1Q3ULM6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Uspl1Q3ULM6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Uspl1Q3ULM6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Uspl1Q3ULM6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Uspl1Q3ULM6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Uspl1Q3ULM6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Uspl1Q3ULM6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Uspl1Q3ULM6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Uspl1Q3ULM6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC23.11■■□□□ 1.29
Uspl1Q3ULM6 Gm22240-201ENSMUST00000175225 82 ntBASIC23.11■■□□□ 1.29
Uspl1Q3ULM6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Uspl1Q3ULM6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Uspl1Q3ULM6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Uspl1Q3ULM6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC23.11■■□□□ 1.29
Uspl1Q3ULM6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Uspl1Q3ULM6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Uspl1Q3ULM6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Uspl1Q3ULM6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Uspl1Q3ULM6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Uspl1Q3ULM6 Gm10418-201ENSMUST00000100943 576 ntBASIC23.1■■□□□ 1.29
Uspl1Q3ULM6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Uspl1Q3ULM6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Uspl1Q3ULM6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Uspl1Q3ULM6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Uspl1Q3ULM6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Uspl1Q3ULM6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Uspl1Q3ULM6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Uspl1Q3ULM6 Gm6576-201ENSMUST00000169678 883 ntBASIC23.09■■□□□ 1.29
Uspl1Q3ULM6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.09■■□□□ 1.29
Uspl1Q3ULM6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC23.09■■□□□ 1.29
Uspl1Q3ULM6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC23.09■■□□□ 1.29
Uspl1Q3ULM6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Uspl1Q3ULM6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Uspl1Q3ULM6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Uspl1Q3ULM6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Uspl1Q3ULM6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Uspl1Q3ULM6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC23.08■■□□□ 1.29
Uspl1Q3ULM6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Uspl1Q3ULM6 Mir8112-201ENSMUST00000184382 131 ntBASIC23.08■■□□□ 1.29
Uspl1Q3ULM6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC23.08■■□□□ 1.29
Uspl1Q3ULM6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Uspl1Q3ULM6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Uspl1Q3ULM6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC23.08■■□□□ 1.29
Uspl1Q3ULM6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Uspl1Q3ULM6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Uspl1Q3ULM6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC23.08■■□□□ 1.29
Uspl1Q3ULM6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC23.08■■□□□ 1.29
Uspl1Q3ULM6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Uspl1Q3ULM6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Uspl1Q3ULM6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Uspl1Q3ULM6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Uspl1Q3ULM6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Uspl1Q3ULM6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Uspl1Q3ULM6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Uspl1Q3ULM6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms