Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43aQ3TL54 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.98■□□□□ 0.63
Trim43aQ3TL54 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43aQ3TL54 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43aQ3TL54 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim43aQ3TL54 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim43aQ3TL54 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Gm13534-201ENSMUST00000121169 513 ntBASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Gm42642-201ENSMUST00000200683 355 ntBASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim43aQ3TL54 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43aQ3TL54 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.94■□□□□ 0.62
Trim43aQ3TL54 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43aQ3TL54 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim43aQ3TL54 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43aQ3TL54 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim43aQ3TL54 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim43aQ3TL54 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43aQ3TL54 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.93■□□□□ 0.62
Trim43aQ3TL54 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43aQ3TL54 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.93■□□□□ 0.62
Trim43aQ3TL54 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim43aQ3TL54 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43aQ3TL54 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim43aQ3TL54 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms