Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Hdac1O09106 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hdac1O09106 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hdac1O09106 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hdac1O09106 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Hdac1O09106 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hdac1O09106 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Hdac1O09106 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hdac1O09106 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hdac1O09106 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hdac1O09106 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hdac1O09106 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.3■■□□□ 1
Hdac1O09106 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Hdac1O09106 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.3■■□□□ 1
Hdac1O09106 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.3■■□□□ 1
Hdac1O09106 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hdac1O09106 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hdac1O09106 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hdac1O09106 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hdac1O09106 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hdac1O09106 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.3■■□□□ 1
Hdac1O09106 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hdac1O09106 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hdac1O09106 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac1O09106 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Hdac1O09106 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac1O09106 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac1O09106 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Hdac1O09106 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hdac1O09106 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Hdac1O09106 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac1O09106 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Hdac1O09106 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac1O09106 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hdac1O09106 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac1O09106 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac1O09106 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac1O09106 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac1O09106 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hdac1O09106 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Hdac1O09106 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac1O09106 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac1O09106 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hdac1O09106 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
Hdac1O09106 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.28■■□□□ 1
Hdac1O09106 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.28■■□□□ 1
Hdac1O09106 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac1O09106 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Hdac1O09106 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac1O09106 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac1O09106 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac1O09106 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac1O09106 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac1O09106 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac1O09106 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Hdac1O09106 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.27■■□□□ 1
Hdac1O09106 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac1O09106 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.27■■□□□ 1
Hdac1O09106 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac1O09106 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Hdac1O09106 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Hdac1O09106 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac1O09106 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac1O09106 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac1O09106 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac1O09106 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hdac1O09106 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac1O09106 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Hdac1O09106 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac1O09106 Gm10493-201ENSMUST00000097270 612 ntBASIC21.26■□□□□ 0.99
Hdac1O09106 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac1O09106 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac1O09106 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Hdac1O09106 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac1O09106 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hdac1O09106 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac1O09106 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac1O09106 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac1O09106 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac1O09106 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Hdac1O09106 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
Hdac1O09106 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.25■□□□□ 0.99
Hdac1O09106 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac1O09106 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Hdac1O09106 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac1O09106 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac1O09106 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac1O09106 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Hdac1O09106 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac1O09106 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac1O09106 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Hdac1O09106 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac1O09106 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.24■□□□□ 0.99
Hdac1O09106 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Hdac1O09106 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Hdac1O09106 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac1O09106 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac1O09106 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac1O09106 Gm42778-201ENSMUST00000199644 553 ntBASIC21.24■□□□□ 0.99
Hdac1O09106 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms