Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.93■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Gm30025-201ENSMUST00000218555 728 ntBASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Gm4974-201ENSMUST00000209974 875 ntBASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-39A0A0G2JDV4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Gm12085-201ENSMUST00000119263 940 ntBASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Gm13836-201ENSMUST00000121159 501 ntBASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.88■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-39A0A0G2JDV4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-39A0A0G2JDV4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms