Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf138Q9CQE0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf138Q9CQE0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rnf138Q9CQE0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rnf138Q9CQE0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.82■□□□□ 0.28
Rnf138Q9CQE0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf138Q9CQE0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.81■□□□□ 0.28
Rnf138Q9CQE0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf138Q9CQE0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.81■□□□□ 0.28
Rnf138Q9CQE0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.81■□□□□ 0.28
Rnf138Q9CQE0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf138Q9CQE0 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.81■□□□□ 0.28
Rnf138Q9CQE0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rnf138Q9CQE0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Rnf138Q9CQE0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rnf138Q9CQE0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.81■□□□□ 0.28
Rnf138Q9CQE0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf138Q9CQE0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.8■□□□□ 0.28
Rnf138Q9CQE0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf138Q9CQE0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf138Q9CQE0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.8■□□□□ 0.28
Rnf138Q9CQE0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.8■□□□□ 0.28
Rnf138Q9CQE0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.8■□□□□ 0.28
Rnf138Q9CQE0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rnf138Q9CQE0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf138Q9CQE0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf138Q9CQE0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf138Q9CQE0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rnf138Q9CQE0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Mir7071-201ENSMUST00000184847 69 ntBASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rnf138Q9CQE0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rnf138Q9CQE0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf138Q9CQE0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf138Q9CQE0 Fst-202ENSMUST00000223640 2612 ntBASIC16.77■□□□□ 0.28
Rnf138Q9CQE0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf138Q9CQE0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf138Q9CQE0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.77■□□□□ 0.28
Rnf138Q9CQE0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf138Q9CQE0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf138Q9CQE0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf138Q9CQE0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rnf138Q9CQE0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf138Q9CQE0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Rnf138Q9CQE0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf138Q9CQE0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Rnf138Q9CQE0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf138Q9CQE0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rnf138Q9CQE0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms