Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc30Q8BVF4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC23.19■■□□□ 1.3
Ccdc30Q8BVF4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc30Q8BVF4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc30Q8BVF4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Ccdc30Q8BVF4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc30Q8BVF4 Idnk-204ENSMUST00000226010 1898 ntBASIC23.18■■□□□ 1.3
Ccdc30Q8BVF4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc30Q8BVF4 Gm27275-201ENSMUST00000184318 272 ntBASIC23.18■■□□□ 1.3
Ccdc30Q8BVF4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc30Q8BVF4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc30Q8BVF4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc30Q8BVF4 Gm12527-201ENSMUST00000117967 564 ntBASIC23.17■■□□□ 1.3
Ccdc30Q8BVF4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.17■■□□□ 1.3
Ccdc30Q8BVF4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc30Q8BVF4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc30Q8BVF4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC23.17■■□□□ 1.3
Ccdc30Q8BVF4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc30Q8BVF4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ccdc30Q8BVF4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ccdc30Q8BVF4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc30Q8BVF4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc30Q8BVF4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC23.16■■□□□ 1.3
Ccdc30Q8BVF4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc30Q8BVF4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc30Q8BVF4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc30Q8BVF4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC23.15■■□□□ 1.3
Ccdc30Q8BVF4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc30Q8BVF4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc30Q8BVF4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC23.14■■□□□ 1.29
Ccdc30Q8BVF4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc30Q8BVF4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.14■■□□□ 1.29
Ccdc30Q8BVF4 Mir2861-201ENSMUST00000175539 82 ntBASIC23.14■■□□□ 1.29
Ccdc30Q8BVF4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.14■■□□□ 1.29
Ccdc30Q8BVF4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc30Q8BVF4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC23.14■■□□□ 1.29
Ccdc30Q8BVF4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc30Q8BVF4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC23.14■■□□□ 1.29
Ccdc30Q8BVF4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc30Q8BVF4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc30Q8BVF4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc30Q8BVF4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc30Q8BVF4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc30Q8BVF4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC23.13■■□□□ 1.29
Ccdc30Q8BVF4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc30Q8BVF4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc30Q8BVF4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc30Q8BVF4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC23.13■■□□□ 1.29
Ccdc30Q8BVF4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc30Q8BVF4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC23.13■■□□□ 1.29
Ccdc30Q8BVF4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc30Q8BVF4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Ccdc30Q8BVF4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc30Q8BVF4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc30Q8BVF4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc30Q8BVF4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc30Q8BVF4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc30Q8BVF4 Gm21596-201ENSMUST00000178049 1316 ntBASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Gm45606-201ENSMUST00000209836 2795 ntBASIC23.1■■□□□ 1.29
Ccdc30Q8BVF4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms