Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Col10a1Q05306 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col10a1Q05306 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col10a1Q05306 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col10a1Q05306 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col10a1Q05306 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col10a1Q05306 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.53■□□□□ 0.24
Col10a1Q05306 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col10a1Q05306 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col10a1Q05306 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col10a1Q05306 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col10a1Q05306 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col10a1Q05306 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col10a1Q05306 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col10a1Q05306 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col10a1Q05306 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Col10a1Q05306 Gm38285-201ENSMUST00000192928 922 ntBASIC16.52■□□□□ 0.24
Col10a1Q05306 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col10a1Q05306 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col10a1Q05306 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col10a1Q05306 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col10a1Q05306 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col10a1Q05306 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.52■□□□□ 0.23
Col10a1Q05306 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col10a1Q05306 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col10a1Q05306 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Col10a1Q05306 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.51■□□□□ 0.23
Col10a1Q05306 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.51■□□□□ 0.23
Col10a1Q05306 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Col10a1Q05306 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.51■□□□□ 0.23
Col10a1Q05306 Gm37856-201ENSMUST00000191634 999 ntBASIC16.51■□□□□ 0.23
Col10a1Q05306 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Col10a1Q05306 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.51■□□□□ 0.23
Col10a1Q05306 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Col10a1Q05306 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col10a1Q05306 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col10a1Q05306 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.5■□□□□ 0.23
Col10a1Q05306 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col10a1Q05306 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col10a1Q05306 Gm11249-201ENSMUST00000117071 859 ntBASIC16.5■□□□□ 0.23
Col10a1Q05306 Gm10653-202ENSMUST00000139570 835 ntBASIC16.5■□□□□ 0.23
Col10a1Q05306 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.5■□□□□ 0.23
Col10a1Q05306 Mtag2-201ENSMUST00000058665 714 ntBASIC16.5■□□□□ 0.23
Col10a1Q05306 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col10a1Q05306 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col10a1Q05306 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col10a1Q05306 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col10a1Q05306 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col10a1Q05306 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col10a1Q05306 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col10a1Q05306 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col10a1Q05306 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.49■□□□□ 0.23
Col10a1Q05306 Trmt13-210ENSMUST00000198454 880 ntBASIC16.49■□□□□ 0.23
Col10a1Q05306 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col10a1Q05306 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col10a1Q05306 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.49■□□□□ 0.23
Col10a1Q05306 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col10a1Q05306 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col10a1Q05306 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col10a1Q05306 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col10a1Q05306 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.48■□□□□ 0.23
Col10a1Q05306 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col10a1Q05306 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col10a1Q05306 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col10a1Q05306 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col10a1Q05306 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.48■□□□□ 0.23
Col10a1Q05306 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col10a1Q05306 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Col10a1Q05306 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col10a1Q05306 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col10a1Q05306 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col10a1Q05306 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms