Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.25■□□□□ 0.51
Thumpd3P97770 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Thumpd3P97770 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Thumpd3P97770 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Thumpd3P97770 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Thumpd3P97770 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Thumpd3P97770 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.25■□□□□ 0.51
Thumpd3P97770 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Thumpd3P97770 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Thumpd3P97770 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Thumpd3P97770 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Thumpd3P97770 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Thumpd3P97770 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Thumpd3P97770 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Thumpd3P97770 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Thumpd3P97770 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Thumpd3P97770 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Thumpd3P97770 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Thumpd3P97770 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Thumpd3P97770 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Thumpd3P97770 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.23■□□□□ 0.51
Thumpd3P97770 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.23■□□□□ 0.51
Thumpd3P97770 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Thumpd3P97770 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Thumpd3P97770 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Thumpd3P97770 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd3P97770 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Thumpd3P97770 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd3P97770 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd3P97770 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd3P97770 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Thumpd3P97770 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd3P97770 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.22■□□□□ 0.51
Thumpd3P97770 Gm38205-201ENSMUST00000192243 258 ntBASIC18.22■□□□□ 0.51
Thumpd3P97770 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Thumpd3P97770 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd3P97770 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.22■□□□□ 0.51
Thumpd3P97770 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd3P97770 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd3P97770 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd3P97770 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd3P97770 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd3P97770 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Thumpd3P97770 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd3P97770 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Thumpd3P97770 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd3P97770 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd3P97770 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd3P97770 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd3P97770 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Thumpd3P97770 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Thumpd3P97770 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd3P97770 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd3P97770 Gm27011-201ENSMUST00000182352 972 ntBASIC18.21■□□□□ 0.51
Thumpd3P97770 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.21■□□□□ 0.51
Thumpd3P97770 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Thumpd3P97770 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd3P97770 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Thumpd3P97770 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd3P97770 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Thumpd3P97770 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.21■□□□□ 0.51
Thumpd3P97770 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd3P97770 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Thumpd3P97770 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Thumpd3P97770 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd3P97770 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Thumpd3P97770 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd3P97770 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Thumpd3P97770 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd3P97770 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd3P97770 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd3P97770 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd3P97770 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd3P97770 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Thumpd3P97770 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd3P97770 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.19■□□□□ 0.5
Thumpd3P97770 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd3P97770 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Thumpd3P97770 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Thumpd3P97770 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Thumpd3P97770 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.19■□□□□ 0.5
Thumpd3P97770 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Thumpd3P97770 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd3P97770 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd3P97770 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.19■□□□□ 0.5
Thumpd3P97770 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd3P97770 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Thumpd3P97770 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms