Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.06■□□□□ 0
Tnfrsf1aP25118 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf1aP25118 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf1aP25118 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf1aP25118 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Tnfrsf1aP25118 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf1aP25118 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf1aP25118 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
Tnfrsf1aP25118 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.05■□□□□ 0
Tnfrsf1aP25118 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf1aP25118 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf1aP25118 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.05■□□□□ 0
Tnfrsf1aP25118 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf1aP25118 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf1aP25118 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf1aP25118 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.05■□□□□ -0
Tnfrsf1aP25118 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.05■□□□□ -0
Tnfrsf1aP25118 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.05■□□□□ -0
Tnfrsf1aP25118 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf1aP25118 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.05■□□□□ -0
Tnfrsf1aP25118 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf1aP25118 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf1aP25118 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf1aP25118 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf1aP25118 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.05■□□□□ -0
Tnfrsf1aP25118 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Tnfrsf1aP25118 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Tnfrsf1aP25118 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf1aP25118 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Fst-202ENSMUST00000223640 2612 ntBASIC15.04■□□□□ -0
Tnfrsf1aP25118 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.04■□□□□ -0
Tnfrsf1aP25118 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf1aP25118 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf1aP25118 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.03■□□□□ -0
Tnfrsf1aP25118 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Gm22325-201ENSMUST00000158904 308 ntBASIC15.03■□□□□ -0
Tnfrsf1aP25118 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.03■□□□□ -0
Tnfrsf1aP25118 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.03■□□□□ -0
Tnfrsf1aP25118 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf1aP25118 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf1aP25118 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.02■□□□□ -0
Tnfrsf1aP25118 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf1aP25118 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Tnfrsf1aP25118 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf1aP25118 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf1aP25118 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf1aP25118 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf1aP25118 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.02■□□□□ -0
Tnfrsf1aP25118 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf1aP25118 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfrsf1aP25118 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Tnfrsf1aP25118 Rarb-207ENSMUST00000225921 2756 ntBASIC15.02□□□□□ -0.01
Tnfrsf1aP25118 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf1aP25118 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf1aP25118 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf1aP25118 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf1aP25118 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf1aP25118 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf1aP25118 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfrsf1aP25118 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfrsf1aP25118 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms