Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3hdm1E9Q9Q2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3hdm1E9Q9Q2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3hdm1E9Q9Q2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
R3hdm1E9Q9Q2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.78■□□□□ 0.76
R3hdm1E9Q9Q2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
R3hdm1E9Q9Q2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
R3hdm1E9Q9Q2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3hdm1E9Q9Q2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3hdm1E9Q9Q2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.78■□□□□ 0.76
R3hdm1E9Q9Q2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.78■□□□□ 0.76
R3hdm1E9Q9Q2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
R3hdm1E9Q9Q2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3hdm1E9Q9Q2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3hdm1E9Q9Q2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3hdm1E9Q9Q2 Gm23634-201ENSMUST00000175071 91 ntBASIC19.77■□□□□ 0.76
R3hdm1E9Q9Q2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.77■□□□□ 0.76
R3hdm1E9Q9Q2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3hdm1E9Q9Q2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3hdm1E9Q9Q2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3hdm1E9Q9Q2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3hdm1E9Q9Q2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
R3hdm1E9Q9Q2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
R3hdm1E9Q9Q2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
R3hdm1E9Q9Q2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
R3hdm1E9Q9Q2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
R3hdm1E9Q9Q2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Grk6-206ENSMUST00000224995 2971 ntBASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3hdm1E9Q9Q2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Odf3b-204ENSMUST00000227834 930 ntBASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3hdm1E9Q9Q2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3hdm1E9Q9Q2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
R3hdm1E9Q9Q2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3hdm1E9Q9Q2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3hdm1E9Q9Q2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3hdm1E9Q9Q2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3hdm1E9Q9Q2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.74■□□□□ 0.75
R3hdm1E9Q9Q2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3hdm1E9Q9Q2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3hdm1E9Q9Q2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
R3hdm1E9Q9Q2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3hdm1E9Q9Q2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3hdm1E9Q9Q2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
R3hdm1E9Q9Q2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3hdm1E9Q9Q2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
R3hdm1E9Q9Q2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
R3hdm1E9Q9Q2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
R3hdm1E9Q9Q2 Gm3375-201ENSMUST00000203929 796 ntBASIC19.73■□□□□ 0.75
R3hdm1E9Q9Q2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3hdm1E9Q9Q2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3hdm1E9Q9Q2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
R3hdm1E9Q9Q2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
R3hdm1E9Q9Q2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Gm42545-201ENSMUST00000202755 922 ntBASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Gm18025-201ENSMUST00000221733 862 ntBASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Timm23-208ENSMUST00000226683 750 ntBASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3hdm1E9Q9Q2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms