Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smco4Q9JIS3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco4Q9JIS3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smco4Q9JIS3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smco4Q9JIS3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smco4Q9JIS3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smco4Q9JIS3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.52□□□□□ -0.08
Smco4Q9JIS3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco4Q9JIS3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco4Q9JIS3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco4Q9JIS3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco4Q9JIS3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco4Q9JIS3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Smco4Q9JIS3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Smco4Q9JIS3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smco4Q9JIS3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smco4Q9JIS3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smco4Q9JIS3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smco4Q9JIS3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smco4Q9JIS3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smco4Q9JIS3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smco4Q9JIS3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.51□□□□□ -0.09
Smco4Q9JIS3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco4Q9JIS3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
Smco4Q9JIS3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Smco4Q9JIS3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Smco4Q9JIS3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.5□□□□□ -0.09
Smco4Q9JIS3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco4Q9JIS3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Smco4Q9JIS3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms