Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scube3Q66PY1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Scube3Q66PY1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
Scube3Q66PY1 Gm18666-201ENSMUST00000190039 958 ntBASIC18.87■□□□□ 0.61
Scube3Q66PY1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scube3Q66PY1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scube3Q66PY1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scube3Q66PY1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scube3Q66PY1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scube3Q66PY1 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.86■□□□□ 0.61
Scube3Q66PY1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scube3Q66PY1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.86■□□□□ 0.61
Scube3Q66PY1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scube3Q66PY1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scube3Q66PY1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.86■□□□□ 0.61
Scube3Q66PY1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scube3Q66PY1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scube3Q66PY1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scube3Q66PY1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scube3Q66PY1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scube3Q66PY1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scube3Q66PY1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scube3Q66PY1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.85■□□□□ 0.61
Scube3Q66PY1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scube3Q66PY1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scube3Q66PY1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Scube3Q66PY1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scube3Q66PY1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.85■□□□□ 0.61
Scube3Q66PY1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.85■□□□□ 0.61
Scube3Q66PY1 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.85■□□□□ 0.61
Scube3Q66PY1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.85■□□□□ 0.61
Scube3Q66PY1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scube3Q66PY1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Scube3Q66PY1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scube3Q66PY1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scube3Q66PY1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scube3Q66PY1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.85■□□□□ 0.61
Scube3Q66PY1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scube3Q66PY1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Scube3Q66PY1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scube3Q66PY1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scube3Q66PY1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scube3Q66PY1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scube3Q66PY1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scube3Q66PY1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Scube3Q66PY1 Gm10138-203ENSMUST00000206952 366 ntBASIC18.84■□□□□ 0.61
Scube3Q66PY1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scube3Q66PY1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.84■□□□□ 0.61
Scube3Q66PY1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scube3Q66PY1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scube3Q66PY1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scube3Q66PY1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scube3Q66PY1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scube3Q66PY1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scube3Q66PY1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scube3Q66PY1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scube3Q66PY1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scube3Q66PY1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scube3Q66PY1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scube3Q66PY1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scube3Q66PY1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.83■□□□□ 0.61
Scube3Q66PY1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Scube3Q66PY1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.83■□□□□ 0.6
Scube3Q66PY1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scube3Q66PY1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.83■□□□□ 0.6
Scube3Q66PY1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.83■□□□□ 0.6
Scube3Q66PY1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.83■□□□□ 0.6
Scube3Q66PY1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scube3Q66PY1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.83■□□□□ 0.6
Scube3Q66PY1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Scube3Q66PY1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scube3Q66PY1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scube3Q66PY1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scube3Q66PY1 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.81■□□□□ 0.6
Scube3Q66PY1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.81■□□□□ 0.6
Scube3Q66PY1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Scube3Q66PY1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scube3Q66PY1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scube3Q66PY1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scube3Q66PY1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scube3Q66PY1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.81■□□□□ 0.6
Scube3Q66PY1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scube3Q66PY1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Scube3Q66PY1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scube3Q66PY1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scube3Q66PY1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms