Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Brf2Q3UAW9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brf2Q3UAW9 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.97■□□□□ 0.31
Brf2Q3UAW9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brf2Q3UAW9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Brf2Q3UAW9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brf2Q3UAW9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Brf2Q3UAW9 Gm6211-202ENSMUST00000167849 925 ntBASIC16.97■□□□□ 0.31
Brf2Q3UAW9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brf2Q3UAW9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.97■□□□□ 0.31
Brf2Q3UAW9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.97■□□□□ 0.31
Brf2Q3UAW9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brf2Q3UAW9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brf2Q3UAW9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brf2Q3UAW9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brf2Q3UAW9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Brf2Q3UAW9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Brf2Q3UAW9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.96■□□□□ 0.3
Brf2Q3UAW9 Fst-202ENSMUST00000223640 2612 ntBASIC16.96■□□□□ 0.3
Brf2Q3UAW9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Brf2Q3UAW9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Gm27405-201ENSMUST00000184201 112 ntBASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brf2Q3UAW9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Brf2Q3UAW9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.93■□□□□ 0.3
Brf2Q3UAW9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Gm7291-201ENSMUST00000199147 382 ntBASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Brf2Q3UAW9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms