Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scube3Q66PY1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scube3Q66PY1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scube3Q66PY1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scube3Q66PY1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.95■□□□□ 0.62
Scube3Q66PY1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scube3Q66PY1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scube3Q66PY1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.95■□□□□ 0.62
Scube3Q66PY1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scube3Q66PY1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scube3Q66PY1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scube3Q66PY1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scube3Q66PY1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scube3Q66PY1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scube3Q66PY1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scube3Q66PY1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scube3Q66PY1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.94■□□□□ 0.62
Scube3Q66PY1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Scube3Q66PY1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scube3Q66PY1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scube3Q66PY1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
Scube3Q66PY1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Scube3Q66PY1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scube3Q66PY1 Gm13168-201ENSMUST00000121771 632 ntBASIC18.93■□□□□ 0.62
Scube3Q66PY1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.93■□□□□ 0.62
Scube3Q66PY1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.93■□□□□ 0.62
Scube3Q66PY1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scube3Q66PY1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scube3Q66PY1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scube3Q66PY1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scube3Q66PY1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scube3Q66PY1 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.92■□□□□ 0.62
Scube3Q66PY1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scube3Q66PY1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.92■□□□□ 0.62
Scube3Q66PY1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scube3Q66PY1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scube3Q66PY1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Scube3Q66PY1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scube3Q66PY1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Scube3Q66PY1 Tgds-204ENSMUST00000228543 1594 ntBASIC18.92■□□□□ 0.62
Scube3Q66PY1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scube3Q66PY1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scube3Q66PY1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Scube3Q66PY1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scube3Q66PY1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Scube3Q66PY1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scube3Q66PY1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scube3Q66PY1 Gm5643-201ENSMUST00000117081 966 ntBASIC18.91■□□□□ 0.62
Scube3Q66PY1 Gm13158-201ENSMUST00000122007 736 ntBASIC18.91■□□□□ 0.62
Scube3Q66PY1 Gm8520-201ENSMUST00000186517 868 ntBASIC18.91■□□□□ 0.62
Scube3Q66PY1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scube3Q66PY1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scube3Q66PY1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scube3Q66PY1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Scube3Q66PY1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scube3Q66PY1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scube3Q66PY1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scube3Q66PY1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.9■□□□□ 0.62
Scube3Q66PY1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.9■□□□□ 0.62
Scube3Q66PY1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scube3Q66PY1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scube3Q66PY1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scube3Q66PY1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Scube3Q66PY1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scube3Q66PY1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scube3Q66PY1 Gm22240-201ENSMUST00000175225 82 ntBASIC18.88■□□□□ 0.61
Scube3Q66PY1 Gm42790-201ENSMUST00000201268 969 ntBASIC18.88■□□□□ 0.61
Scube3Q66PY1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scube3Q66PY1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scube3Q66PY1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scube3Q66PY1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scube3Q66PY1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scube3Q66PY1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scube3Q66PY1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 166.1 ms