Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.06■□□□□ 0.32
Nkx6-3Q3UHX8 Mir2861-201ENSMUST00000175539 82 ntBASIC17.06■□□□□ 0.32
Nkx6-3Q3UHX8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-3Q3UHX8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-3Q3UHX8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-3Q3UHX8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-3Q3UHX8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-3Q3UHX8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nkx6-3Q3UHX8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-3Q3UHX8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-3Q3UHX8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Mir6349-201ENSMUST00000184059 97 ntBASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-3Q3UHX8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nkx6-3Q3UHX8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Gm18025-201ENSMUST00000221733 862 ntBASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.03■□□□□ 0.32
Nkx6-3Q3UHX8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.02■□□□□ 0.32
Nkx6-3Q3UHX8 Fst-202ENSMUST00000223640 2612 ntBASIC17.02■□□□□ 0.32
Nkx6-3Q3UHX8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-3Q3UHX8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-3Q3UHX8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-3Q3UHX8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-3Q3UHX8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-3Q3UHX8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.02■□□□□ 0.32
Nkx6-3Q3UHX8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-3Q3UHX8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-3Q3UHX8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nkx6-3Q3UHX8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx6-3Q3UHX8 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.02■□□□□ 0.31
Nkx6-3Q3UHX8 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.02■□□□□ 0.31
Nkx6-3Q3UHX8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx6-3Q3UHX8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nkx6-3Q3UHX8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Nkx6-3Q3UHX8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.02■□□□□ 0.31
Nkx6-3Q3UHX8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.01■□□□□ 0.31
Nkx6-3Q3UHX8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Gm42545-201ENSMUST00000202755 922 ntBASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 AC153881.1-201ENSMUST00000214448 284 ntBASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx6-3Q3UHX8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms