Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Thumpd3P97770 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Thumpd3P97770 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.38■□□□□ 0.53
Thumpd3P97770 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Thumpd3P97770 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Thumpd3P97770 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Thumpd3P97770 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Thumpd3P97770 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thumpd3P97770 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.37■□□□□ 0.53
Thumpd3P97770 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thumpd3P97770 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thumpd3P97770 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thumpd3P97770 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.37■□□□□ 0.53
Thumpd3P97770 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Thumpd3P97770 Gm10602-201ENSMUST00000098239 609 ntBASIC18.37■□□□□ 0.53
Thumpd3P97770 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Thumpd3P97770 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.37■□□□□ 0.53
Thumpd3P97770 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thumpd3P97770 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thumpd3P97770 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Thumpd3P97770 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Thumpd3P97770 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.36■□□□□ 0.53
Thumpd3P97770 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Thumpd3P97770 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Thumpd3P97770 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.36■□□□□ 0.53
Thumpd3P97770 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Thumpd3P97770 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.36■□□□□ 0.53
Thumpd3P97770 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Thumpd3P97770 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Thumpd3P97770 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Thumpd3P97770 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Thumpd3P97770 Fst-202ENSMUST00000223640 2612 ntBASIC18.36■□□□□ 0.53
Thumpd3P97770 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Thumpd3P97770 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.35■□□□□ 0.53
Thumpd3P97770 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Thumpd3P97770 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.34■□□□□ 0.53
Thumpd3P97770 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.34■□□□□ 0.53
Thumpd3P97770 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Thumpd3P97770 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Gm7514-201ENSMUST00000209475 934 ntBASIC18.34■□□□□ 0.53
Thumpd3P97770 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Thumpd3P97770 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Thumpd3P97770 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Thumpd3P97770 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Thumpd3P97770 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Thumpd3P97770 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.33■□□□□ 0.52
Thumpd3P97770 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.33■□□□□ 0.52
Thumpd3P97770 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Thumpd3P97770 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Thumpd3P97770 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Thumpd3P97770 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Thumpd3P97770 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Thumpd3P97770 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.33■□□□□ 0.52
Thumpd3P97770 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Thumpd3P97770 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Thumpd3P97770 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Thumpd3P97770 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Thumpd3P97770 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Thumpd3P97770 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Thumpd3P97770 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Thumpd3P97770 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.32■□□□□ 0.52
Thumpd3P97770 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.32■□□□□ 0.52
Thumpd3P97770 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.32■□□□□ 0.52
Thumpd3P97770 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms