Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cacna1aP97445 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.64■□□□□ 0.25
Cacna1aP97445 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Cacna1aP97445 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cacna1aP97445 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Cacna1aP97445 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cacna1aP97445 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.63■□□□□ 0.25
Cacna1aP97445 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1aP97445 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1aP97445 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1aP97445 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1aP97445 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1aP97445 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cacna1aP97445 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1aP97445 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.62■□□□□ 0.25
Cacna1aP97445 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1aP97445 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1aP97445 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.62■□□□□ 0.25
Cacna1aP97445 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1aP97445 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cacna1aP97445 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cacna1aP97445 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1aP97445 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cacna1aP97445 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cacna1aP97445 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1aP97445 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacna1aP97445 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cacna1aP97445 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1aP97445 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cacna1aP97445 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1aP97445 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.61■□□□□ 0.25
Cacna1aP97445 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cacna1aP97445 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Cacna1aP97445 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1aP97445 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cacna1aP97445 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cacna1aP97445 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1aP97445 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1aP97445 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1aP97445 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1aP97445 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1aP97445 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cacna1aP97445 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.6■□□□□ 0.25
Cacna1aP97445 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1aP97445 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Cacna1aP97445 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1aP97445 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1aP97445 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1aP97445 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1aP97445 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1aP97445 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Cacna1aP97445 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cacna1aP97445 Gm28033-201ENSMUST00000184224 96 ntBASIC16.6■□□□□ 0.25
Cacna1aP97445 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1aP97445 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1aP97445 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1aP97445 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1aP97445 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cacna1aP97445 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacna1aP97445 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cacna1aP97445 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1aP97445 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cacna1aP97445 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.59■□□□□ 0.25
Cacna1aP97445 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1aP97445 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1aP97445 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1aP97445 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1aP97445 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cacna1aP97445 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cacna1aP97445 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1aP97445 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1aP97445 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1aP97445 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.59■□□□□ 0.25
Cacna1aP97445 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.59■□□□□ 0.25
Cacna1aP97445 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1aP97445 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.59■□□□□ 0.25
Cacna1aP97445 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1aP97445 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacna1aP97445 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacna1aP97445 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Cacna1aP97445 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms