Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC26.79■■□□□ 1.88
NclP09405 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
NclP09405 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
NclP09405 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
NclP09405 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
NclP09405 Mir6349-201ENSMUST00000184059 97 ntBASIC26.78■■□□□ 1.88
NclP09405 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NclP09405 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NclP09405 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
NclP09405 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
NclP09405 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NclP09405 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NclP09405 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NclP09405 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NclP09405 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NclP09405 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC26.77■■□□□ 1.88
NclP09405 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
NclP09405 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC26.77■■□□□ 1.88
NclP09405 Gm42545-201ENSMUST00000202755 922 ntBASIC26.77■■□□□ 1.88
NclP09405 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
NclP09405 AC175538.1-201ENSMUST00000225343 1269 ntBASIC26.77■■□□□ 1.88
NclP09405 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
NclP09405 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NclP09405 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
NclP09405 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
NclP09405 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NclP09405 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC26.76■■□□□ 1.87
NclP09405 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
NclP09405 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NclP09405 Gm9194-201ENSMUST00000220749 1447 ntBASIC26.76■■□□□ 1.87
NclP09405 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC26.76■■□□□ 1.87
NclP09405 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
NclP09405 Gm9484-201ENSMUST00000195892 1159 ntBASIC26.76■■□□□ 1.87
NclP09405 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
NclP09405 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
NclP09405 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NclP09405 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC26.75■■□□□ 1.87
NclP09405 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC26.75■■□□□ 1.87
NclP09405 AC124581.1-201ENSMUST00000225416 1399 ntBASIC26.75■■□□□ 1.87
NclP09405 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NclP09405 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
NclP09405 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
NclP09405 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
NclP09405 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC26.75■■□□□ 1.87
NclP09405 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NclP09405 Dapk1-207ENSMUST00000226059 5009 ntBASIC26.75■■□□□ 1.87
NclP09405 Gm45906-201ENSMUST00000208911 1430 ntBASIC26.74■■□□□ 1.87
NclP09405 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NclP09405 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NclP09405 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NclP09405 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC26.74■■□□□ 1.87
NclP09405 Mir5122-201ENSMUST00000175004 89 ntBASIC26.74■■□□□ 1.87
NclP09405 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC26.74■■□□□ 1.87
NclP09405 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NclP09405 Gm43231-201ENSMUST00000202960 2258 ntBASIC26.74■■□□□ 1.87
NclP09405 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NclP09405 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
NclP09405 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NclP09405 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC26.73■■□□□ 1.87
NclP09405 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC26.73■■□□□ 1.87
NclP09405 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
NclP09405 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NclP09405 AC158538.1-201ENSMUST00000225870 294 ntBASIC26.73■■□□□ 1.87
NclP09405 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
NclP09405 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NclP09405 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
NclP09405 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NclP09405 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NclP09405 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
NclP09405 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NclP09405 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NclP09405 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NclP09405 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
NclP09405 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
NclP09405 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
NclP09405 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
NclP09405 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC26.72■■□□□ 1.87
NclP09405 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
NclP09405 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC26.72■■□□□ 1.87
NclP09405 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
NclP09405 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NclP09405 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NclP09405 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NclP09405 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
NclP09405 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NclP09405 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
NclP09405 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC26.71■■□□□ 1.87
NclP09405 Gm37292-201ENSMUST00000192062 758 ntBASIC26.71■■□□□ 1.87
NclP09405 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NclP09405 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
NclP09405 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
NclP09405 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
NclP09405 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
NclP09405 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
NclP09405 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
NclP09405 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC26.7■■□□□ 1.87
NclP09405 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
NclP09405 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
NclP09405 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC26.7■■□□□ 1.87
NclP09405 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms