Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgn5Q9JL35 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Tgds-204ENSMUST00000228543 1594 ntBASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgn5Q9JL35 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Hmgn5Q9JL35 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmgn5Q9JL35 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmgn5Q9JL35 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmgn5Q9JL35 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmgn5Q9JL35 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmgn5Q9JL35 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmgn5Q9JL35 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgn5Q9JL35 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgn5Q9JL35 Gm12922-201ENSMUST00000120626 809 ntBASIC20.39■□□□□ 0.85
Hmgn5Q9JL35 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.39■□□□□ 0.85
Hmgn5Q9JL35 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgn5Q9JL35 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.39■□□□□ 0.85
Hmgn5Q9JL35 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgn5Q9JL35 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Hmgn5Q9JL35 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn5Q9JL35 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Hmgn5Q9JL35 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn5Q9JL35 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn5Q9JL35 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn5Q9JL35 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn5Q9JL35 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hmgn5Q9JL35 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn5Q9JL35 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn5Q9JL35 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn5Q9JL35 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Hmgn5Q9JL35 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgn5Q9JL35 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 Gm27801-201ENSMUST00000184174 223 ntBASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Hmgn5Q9JL35 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Gm11421-201ENSMUST00000122124 294 ntBASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgn5Q9JL35 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgn5Q9JL35 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgn5Q9JL35 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms