Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rsph3bQ9DA80 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.83■□□□□ 0.77
Rsph3bQ9DA80 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rsph3bQ9DA80 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rsph3bQ9DA80 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rsph3bQ9DA80 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.83■□□□□ 0.77
Rsph3bQ9DA80 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.83■□□□□ 0.77
Rsph3bQ9DA80 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.83■□□□□ 0.77
Rsph3bQ9DA80 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rsph3bQ9DA80 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rsph3bQ9DA80 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rsph3bQ9DA80 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rsph3bQ9DA80 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rsph3bQ9DA80 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rsph3bQ9DA80 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rsph3bQ9DA80 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Mir1199-201ENSMUST00000117015 119 ntBASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rsph3bQ9DA80 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Gm10138-203ENSMUST00000206952 366 ntBASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rsph3bQ9DA80 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Gm38285-201ENSMUST00000192928 922 ntBASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rsph3bQ9DA80 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rsph3bQ9DA80 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rsph3bQ9DA80 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms