Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smg8Q8VE18 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smg8Q8VE18 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smg8Q8VE18 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.35■□□□□ 0.69
Smg8Q8VE18 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.35■□□□□ 0.69
Smg8Q8VE18 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.35■□□□□ 0.69
Smg8Q8VE18 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.35■□□□□ 0.69
Smg8Q8VE18 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smg8Q8VE18 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smg8Q8VE18 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smg8Q8VE18 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smg8Q8VE18 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.35■□□□□ 0.69
Smg8Q8VE18 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smg8Q8VE18 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smg8Q8VE18 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smg8Q8VE18 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.34■□□□□ 0.69
Smg8Q8VE18 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Mir6349-201ENSMUST00000184059 97 ntBASIC19.34■□□□□ 0.69
Smg8Q8VE18 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.34■□□□□ 0.69
Smg8Q8VE18 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smg8Q8VE18 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smg8Q8VE18 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.69
Smg8Q8VE18 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smg8Q8VE18 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smg8Q8VE18 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smg8Q8VE18 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smg8Q8VE18 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smg8Q8VE18 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Smg8Q8VE18 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smg8Q8VE18 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smg8Q8VE18 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.33■□□□□ 0.68
Smg8Q8VE18 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.33■□□□□ 0.68
Smg8Q8VE18 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Smg8Q8VE18 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.33■□□□□ 0.68
Smg8Q8VE18 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smg8Q8VE18 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smg8Q8VE18 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smg8Q8VE18 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.32■□□□□ 0.68
Smg8Q8VE18 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smg8Q8VE18 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Smg8Q8VE18 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smg8Q8VE18 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smg8Q8VE18 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smg8Q8VE18 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.32■□□□□ 0.68
Smg8Q8VE18 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Smg8Q8VE18 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Smg8Q8VE18 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smg8Q8VE18 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Smg8Q8VE18 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.32■□□□□ 0.68
Smg8Q8VE18 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smg8Q8VE18 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.32■□□□□ 0.68
Smg8Q8VE18 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smg8Q8VE18 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smg8Q8VE18 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.31■□□□□ 0.68
Smg8Q8VE18 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.31■□□□□ 0.68
Smg8Q8VE18 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Smg8Q8VE18 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smg8Q8VE18 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smg8Q8VE18 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smg8Q8VE18 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smg8Q8VE18 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smg8Q8VE18 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.31■□□□□ 0.68
Smg8Q8VE18 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smg8Q8VE18 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.31■□□□□ 0.68
Smg8Q8VE18 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smg8Q8VE18 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Smg8Q8VE18 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.3■□□□□ 0.68
Smg8Q8VE18 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smg8Q8VE18 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.3■□□□□ 0.68
Smg8Q8VE18 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smg8Q8VE18 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Smg8Q8VE18 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.3■□□□□ 0.68
Smg8Q8VE18 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smg8Q8VE18 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smg8Q8VE18 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smg8Q8VE18 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smg8Q8VE18 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smg8Q8VE18 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smg8Q8VE18 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms