Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Rtl1Q7M732 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
Rtl1Q7M732 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Rtl1Q7M732 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Rtl1Q7M732 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC32.46■■■□□ 2.79
Rtl1Q7M732 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Rtl1Q7M732 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Rtl1Q7M732 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC32.46■■■□□ 2.79
Rtl1Q7M732 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Rtl1Q7M732 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
Rtl1Q7M732 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Rtl1Q7M732 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Rtl1Q7M732 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Rtl1Q7M732 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC32.45■■■□□ 2.78
Rtl1Q7M732 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Rtl1Q7M732 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Rtl1Q7M732 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Rtl1Q7M732 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Rtl1Q7M732 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Rtl1Q7M732 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC32.44■■■□□ 2.78
Rtl1Q7M732 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Rtl1Q7M732 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Rtl1Q7M732 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rtl1Q7M732 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rtl1Q7M732 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rtl1Q7M732 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rtl1Q7M732 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
Rtl1Q7M732 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC32.43■■■□□ 2.78
Rtl1Q7M732 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
Rtl1Q7M732 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
Rtl1Q7M732 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
Rtl1Q7M732 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
Rtl1Q7M732 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Rtl1Q7M732 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
Rtl1Q7M732 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rtl1Q7M732 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC32.41■■■□□ 2.78
Rtl1Q7M732 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Rtl1Q7M732 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC32.41■■■□□ 2.78
Rtl1Q7M732 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rtl1Q7M732 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rtl1Q7M732 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC32.4■■■□□ 2.78
Rtl1Q7M732 AC153881.2-201ENSMUST00000214877 204 ntBASIC32.4■■■□□ 2.78
Rtl1Q7M732 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rtl1Q7M732 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC32.39■■■□□ 2.78
Rtl1Q7M732 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rtl1Q7M732 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
Rtl1Q7M732 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC32.39■■■□□ 2.78
Rtl1Q7M732 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rtl1Q7M732 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Rtl1Q7M732 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rtl1Q7M732 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rtl1Q7M732 Gm20472-201ENSMUST00000174403 1240 ntBASIC32.38■■■□□ 2.77
Rtl1Q7M732 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rtl1Q7M732 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC32.38■■■□□ 2.77
Rtl1Q7M732 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rtl1Q7M732 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rtl1Q7M732 Arhgef4-208ENSMUST00000211073 171 ntBASIC32.37■■■□□ 2.77
Rtl1Q7M732 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC32.37■■■□□ 2.77
Rtl1Q7M732 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rtl1Q7M732 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rtl1Q7M732 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rtl1Q7M732 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Rtl1Q7M732 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC32.37■■■□□ 2.77
Rtl1Q7M732 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC32.37■■■□□ 2.77
Rtl1Q7M732 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC32.37■■■□□ 2.77
Rtl1Q7M732 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rtl1Q7M732 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC32.37■■■□□ 2.77
Rtl1Q7M732 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
Rtl1Q7M732 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
Rtl1Q7M732 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC32.35■■■□□ 2.77
Rtl1Q7M732 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Rtl1Q7M732 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Rtl1Q7M732 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms