Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20■□□□□ 0.79
Smchd1Q6P5D8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Smchd1Q6P5D8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smchd1Q6P5D8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smchd1Q6P5D8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smchd1Q6P5D8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.99■□□□□ 0.79
Smchd1Q6P5D8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.99■□□□□ 0.79
Smchd1Q6P5D8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smchd1Q6P5D8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smchd1Q6P5D8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smchd1Q6P5D8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Gm43799-201ENSMUST00000201845 579 ntBASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smchd1Q6P5D8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smchd1Q6P5D8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.96■□□□□ 0.79
Smchd1Q6P5D8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smchd1Q6P5D8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smchd1Q6P5D8 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.96■□□□□ 0.79
Smchd1Q6P5D8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smchd1Q6P5D8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smchd1Q6P5D8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Tgds-204ENSMUST00000228543 1594 ntBASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smchd1Q6P5D8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smchd1Q6P5D8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Mir2861-201ENSMUST00000175539 82 ntBASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smchd1Q6P5D8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smchd1Q6P5D8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms