Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shroom1Q5SX79 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shroom1Q5SX79 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shroom1Q5SX79 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shroom1Q5SX79 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shroom1Q5SX79 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shroom1Q5SX79 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shroom1Q5SX79 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.27■□□□□ 0.68
Shroom1Q5SX79 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.27■□□□□ 0.68
Shroom1Q5SX79 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.27■□□□□ 0.68
Shroom1Q5SX79 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shroom1Q5SX79 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Shroom1Q5SX79 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.26■□□□□ 0.67
Shroom1Q5SX79 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.26■□□□□ 0.67
Shroom1Q5SX79 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom1Q5SX79 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom1Q5SX79 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom1Q5SX79 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.26■□□□□ 0.67
Shroom1Q5SX79 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom1Q5SX79 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.26■□□□□ 0.67
Shroom1Q5SX79 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom1Q5SX79 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Shroom1Q5SX79 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Shroom1Q5SX79 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Shroom1Q5SX79 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shroom1Q5SX79 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shroom1Q5SX79 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shroom1Q5SX79 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Shroom1Q5SX79 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shroom1Q5SX79 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shroom1Q5SX79 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shroom1Q5SX79 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shroom1Q5SX79 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shroom1Q5SX79 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Shroom1Q5SX79 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.25■□□□□ 0.67
Shroom1Q5SX79 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shroom1Q5SX79 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shroom1Q5SX79 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shroom1Q5SX79 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shroom1Q5SX79 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shroom1Q5SX79 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.23■□□□□ 0.67
Shroom1Q5SX79 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.23■□□□□ 0.67
Shroom1Q5SX79 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Shroom1Q5SX79 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shroom1Q5SX79 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Shroom1Q5SX79 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shroom1Q5SX79 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shroom1Q5SX79 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shroom1Q5SX79 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.22■□□□□ 0.67
Shroom1Q5SX79 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom1Q5SX79 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom1Q5SX79 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.21■□□□□ 0.67
Shroom1Q5SX79 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom1Q5SX79 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom1Q5SX79 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shroom1Q5SX79 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shroom1Q5SX79 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shroom1Q5SX79 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms