Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Gm10138-203ENSMUST00000206952 366 ntBASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx6-3Q3UHX8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Gm10698-201ENSMUST00000182663 604 ntBASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-3Q3UHX8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nkx6-3Q3UHX8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-3Q3UHX8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-3Q3UHX8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-3Q3UHX8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.11■□□□□ 0.33
Nkx6-3Q3UHX8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-3Q3UHX8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.11■□□□□ 0.33
Nkx6-3Q3UHX8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nkx6-3Q3UHX8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-3Q3UHX8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-3Q3UHX8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Gm15375-201ENSMUST00000119510 849 ntBASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-3Q3UHX8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx6-3Q3UHX8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Nkx6-3Q3UHX8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx6-3Q3UHX8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx6-3Q3UHX8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx6-3Q3UHX8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Nkx6-3Q3UHX8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx6-3Q3UHX8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Nkx6-3Q3UHX8 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.08■□□□□ 0.32
Nkx6-3Q3UHX8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.08■□□□□ 0.32
Nkx6-3Q3UHX8 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx6-3Q3UHX8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx6-3Q3UHX8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
Nkx6-3Q3UHX8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx6-3Q3UHX8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx6-3Q3UHX8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx6-3Q3UHX8 Gm10812-201ENSMUST00000099864 546 ntBASIC17.08■□□□□ 0.32
Nkx6-3Q3UHX8 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.08■□□□□ 0.32
Nkx6-3Q3UHX8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nkx6-3Q3UHX8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Nkx6-3Q3UHX8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.07■□□□□ 0.32
Nkx6-3Q3UHX8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-3Q3UHX8 Gm15378-201ENSMUST00000121894 207 ntBASIC17.07■□□□□ 0.32
Nkx6-3Q3UHX8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-3Q3UHX8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-3Q3UHX8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nkx6-3Q3UHX8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Nkx6-3Q3UHX8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-3Q3UHX8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-3Q3UHX8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-3Q3UHX8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms