Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim43aQ3TL54 Gm8969-201ENSMUST00000199694 526 ntBASIC19.22■□□□□ 0.67
Trim43aQ3TL54 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim43aQ3TL54 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim43aQ3TL54 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43aQ3TL54 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43aQ3TL54 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43aQ3TL54 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43aQ3TL54 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim43aQ3TL54 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.66
Trim43aQ3TL54 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim43aQ3TL54 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.2■□□□□ 0.66
Trim43aQ3TL54 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43aQ3TL54 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43aQ3TL54 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43aQ3TL54 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43aQ3TL54 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim43aQ3TL54 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.19■□□□□ 0.66
Trim43aQ3TL54 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43aQ3TL54 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43aQ3TL54 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim43aQ3TL54 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43aQ3TL54 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim43aQ3TL54 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim43aQ3TL54 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim43aQ3TL54 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43aQ3TL54 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43aQ3TL54 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms