Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Grk6-206ENSMUST00000224995 2971 ntBASIC14.53□□□□□ -0.08
Cd27P41272 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd27P41272 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd27P41272 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cd27P41272 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cd27P41272 Dio3-201ENSMUST00000097228 1449 ntBASIC14.53□□□□□ -0.08
Cd27P41272 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd27P41272 Gm12896-201ENSMUST00000118430 226 ntBASIC14.53□□□□□ -0.08
Cd27P41272 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.53□□□□□ -0.08
Cd27P41272 Gm27275-201ENSMUST00000184318 272 ntBASIC14.53□□□□□ -0.08
Cd27P41272 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cd27P41272 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.53□□□□□ -0.08
Cd27P41272 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cd27P41272 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.53□□□□□ -0.08
Cd27P41272 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cd27P41272 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd27P41272 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cd27P41272 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd27P41272 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cd27P41272 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd27P41272 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.52□□□□□ -0.08
Cd27P41272 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.52□□□□□ -0.08
Cd27P41272 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd27P41272 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd27P41272 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd27P41272 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd27P41272 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd27P41272 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.52□□□□□ -0.09
Cd27P41272 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd27P41272 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Cd27P41272 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd27P41272 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.52□□□□□ -0.09
Cd27P41272 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cd27P41272 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd27P41272 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd27P41272 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
Cd27P41272 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd27P41272 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd27P41272 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.51□□□□□ -0.09
Cd27P41272 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd27P41272 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd27P41272 Gm2559-201ENSMUST00000201323 363 ntBASIC14.51□□□□□ -0.09
Cd27P41272 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd27P41272 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.51□□□□□ -0.09
Cd27P41272 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd27P41272 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.51□□□□□ -0.09
Cd27P41272 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd27P41272 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd27P41272 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cd27P41272 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.5□□□□□ -0.09
Cd27P41272 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.5□□□□□ -0.09
Cd27P41272 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.5□□□□□ -0.09
Cd27P41272 Gm11927-201ENSMUST00000118472 759 ntBASIC14.5□□□□□ -0.09
Cd27P41272 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.5□□□□□ -0.09
Cd27P41272 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.5□□□□□ -0.09
Cd27P41272 Zfp783-201ENSMUST00000095946 670 ntBASIC14.5□□□□□ -0.09
Cd27P41272 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.5□□□□□ -0.09
Cd27P41272 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd27P41272 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd27P41272 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd27P41272 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Cd27P41272 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd27P41272 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd27P41272 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.49□□□□□ -0.09
Cd27P41272 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd27P41272 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.49□□□□□ -0.09
Cd27P41272 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.49□□□□□ -0.09
Cd27P41272 Gm11249-201ENSMUST00000117071 859 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms