Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
NclP09405 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NclP09405 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
NclP09405 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
NclP09405 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC26.87■■□□□ 1.89
NclP09405 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
NclP09405 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NclP09405 Rncr4-201ENSMUST00000194541 2234 ntBASIC26.86■■□□□ 1.89
NclP09405 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
NclP09405 Gm5784-201ENSMUST00000179344 2478 ntBASIC26.86■■□□□ 1.89
NclP09405 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
NclP09405 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC26.86■■□□□ 1.89
NclP09405 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NclP09405 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NclP09405 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NclP09405 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
NclP09405 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NclP09405 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NclP09405 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
NclP09405 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
NclP09405 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC26.85■■□□□ 1.89
NclP09405 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
NclP09405 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
NclP09405 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
NclP09405 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
NclP09405 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
NclP09405 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
NclP09405 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
NclP09405 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC26.84■■□□□ 1.89
NclP09405 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NclP09405 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NclP09405 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC26.84■■□□□ 1.89
NclP09405 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
NclP09405 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NclP09405 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NclP09405 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
NclP09405 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
NclP09405 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NclP09405 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
NclP09405 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NclP09405 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
NclP09405 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NclP09405 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC26.83■■□□□ 1.89
NclP09405 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NclP09405 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NclP09405 Gm45560-201ENSMUST00000211492 1472 ntBASIC26.83■■□□□ 1.89
NclP09405 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
NclP09405 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.89
NclP09405 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
NclP09405 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NclP09405 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
NclP09405 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
NclP09405 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
NclP09405 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
NclP09405 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
NclP09405 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC26.82■■□□□ 1.88
NclP09405 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Gm43183-201ENSMUST00000200632 547 ntBASIC26.82■■□□□ 1.88
NclP09405 Gm18025-201ENSMUST00000221733 862 ntBASIC26.82■■□□□ 1.88
NclP09405 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
NclP09405 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
NclP09405 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
NclP09405 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
NclP09405 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC26.81■■□□□ 1.88
NclP09405 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC26.81■■□□□ 1.88
NclP09405 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NclP09405 BC021767-201ENSMUST00000126387 1716 ntBASIC26.81■■□□□ 1.88
NclP09405 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NclP09405 Gm38342-201ENSMUST00000195710 2980 ntBASIC26.81■■□□□ 1.88
NclP09405 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NclP09405 Gm44544-201ENSMUST00000207052 1844 ntBASIC26.81■■□□□ 1.88
NclP09405 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
NclP09405 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
NclP09405 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC26.8■■□□□ 1.88
NclP09405 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NclP09405 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NclP09405 Gm37055-201ENSMUST00000191866 133 ntBASIC26.8■■□□□ 1.88
NclP09405 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC26.8■■□□□ 1.88
NclP09405 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
NclP09405 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
NclP09405 Gm7856-201ENSMUST00000117514 1493 ntBASIC26.8■■□□□ 1.88
NclP09405 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NclP09405 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NclP09405 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
NclP09405 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
NclP09405 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
NclP09405 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC26.79■■□□□ 1.88
NclP09405 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms