Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Gm38205-201ENSMUST00000192243 258 ntBASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm4Q9QXA5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm4Q9QXA5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Lsm4Q9QXA5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lsm4Q9QXA5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lsm4Q9QXA5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Lsm4Q9QXA5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.33□□□□□ -0.11
Lsm4Q9QXA5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm4Q9QXA5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.32□□□□□ -0.12
Lsm4Q9QXA5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Lsm4Q9QXA5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm4Q9QXA5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm4Q9QXA5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Lsm4Q9QXA5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm4Q9QXA5 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.32□□□□□ -0.12
Lsm4Q9QXA5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm4Q9QXA5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm4Q9QXA5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm4Q9QXA5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm4Q9QXA5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm4Q9QXA5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms