Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smchd1Q6P5D8 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.06■□□□□ 0.8
Smchd1Q6P5D8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smchd1Q6P5D8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smchd1Q6P5D8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.06■□□□□ 0.8
Smchd1Q6P5D8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Smchd1Q6P5D8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smchd1Q6P5D8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smchd1Q6P5D8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smchd1Q6P5D8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Gm37292-201ENSMUST00000192062 758 ntBASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smchd1Q6P5D8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smchd1Q6P5D8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smchd1Q6P5D8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smchd1Q6P5D8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smchd1Q6P5D8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.02■□□□□ 0.8
Smchd1Q6P5D8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Smchd1Q6P5D8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smchd1Q6P5D8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smchd1Q6P5D8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smchd1Q6P5D8 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.02■□□□□ 0.8
Smchd1Q6P5D8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.02■□□□□ 0.8
Smchd1Q6P5D8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smchd1Q6P5D8 Gm43183-201ENSMUST00000200632 547 ntBASIC20.02■□□□□ 0.79
Smchd1Q6P5D8 Gm10138-203ENSMUST00000206952 366 ntBASIC20.02■□□□□ 0.79
Smchd1Q6P5D8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.02■□□□□ 0.79
Smchd1Q6P5D8 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smchd1Q6P5D8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Fst-202ENSMUST00000223640 2612 ntBASIC20■□□□□ 0.79
Smchd1Q6P5D8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Gm12382-201ENSMUST00000122005 922 ntBASIC20■□□□□ 0.79
Smchd1Q6P5D8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smchd1Q6P5D8 Mir6349-201ENSMUST00000184059 97 ntBASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms