Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21■□□□□ 0.95
Foxd1Q61345 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Foxd1Q61345 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Foxd1Q61345 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.99■□□□□ 0.95
Foxd1Q61345 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Foxd1Q61345 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.99■□□□□ 0.95
Foxd1Q61345 Gm18032-201ENSMUST00000222541 538 ntBASIC20.99■□□□□ 0.95
Foxd1Q61345 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.99■□□□□ 0.95
Foxd1Q61345 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd1Q61345 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd1Q61345 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd1Q61345 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd1Q61345 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd1Q61345 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Foxd1Q61345 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd1Q61345 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Foxd1Q61345 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxd1Q61345 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxd1Q61345 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Foxd1Q61345 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.98■□□□□ 0.95
Foxd1Q61345 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.98■□□□□ 0.95
Foxd1Q61345 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxd1Q61345 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Foxd1Q61345 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.98■□□□□ 0.95
Foxd1Q61345 Gm43183-201ENSMUST00000200632 547 ntBASIC20.98■□□□□ 0.95
Foxd1Q61345 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxd1Q61345 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Foxd1Q61345 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxd1Q61345 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxd1Q61345 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Foxd1Q61345 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Foxd1Q61345 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.97■□□□□ 0.95
Foxd1Q61345 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Foxd1Q61345 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Foxd1Q61345 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Foxd1Q61345 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxd1Q61345 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxd1Q61345 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxd1Q61345 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxd1Q61345 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxd1Q61345 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Foxd1Q61345 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxd1Q61345 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.96■□□□□ 0.95
Foxd1Q61345 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxd1Q61345 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Foxd1Q61345 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Foxd1Q61345 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Foxd1Q61345 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxd1Q61345 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxd1Q61345 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxd1Q61345 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.95■□□□□ 0.94
Foxd1Q61345 Gm28033-201ENSMUST00000184224 96 ntBASIC20.95■□□□□ 0.94
Foxd1Q61345 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.95■□□□□ 0.94
Foxd1Q61345 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Foxd1Q61345 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Foxd1Q61345 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxd1Q61345 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Foxd1Q61345 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Foxd1Q61345 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxd1Q61345 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Foxd1Q61345 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Foxd1Q61345 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.94■□□□□ 0.94
Foxd1Q61345 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 Gm17661-201ENSMUST00000170317 270 ntBASIC20.94■□□□□ 0.94
Foxd1Q61345 Gm42545-201ENSMUST00000202755 922 ntBASIC20.94■□□□□ 0.94
Foxd1Q61345 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Foxd1Q61345 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Foxd1Q61345 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Foxd1Q61345 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Foxd1Q61345 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 153.1 ms