Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim43aQ3TL54 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim43aQ3TL54 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim43aQ3TL54 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim43aQ3TL54 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.27■□□□□ 0.68
Trim43aQ3TL54 Gm38205-201ENSMUST00000192243 258 ntBASIC19.27■□□□□ 0.68
Trim43aQ3TL54 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim43aQ3TL54 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim43aQ3TL54 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim43aQ3TL54 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim43aQ3TL54 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim43aQ3TL54 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim43aQ3TL54 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trim43aQ3TL54 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Tgds-204ENSMUST00000228543 1594 ntBASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim43aQ3TL54 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim43aQ3TL54 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Gm43060-201ENSMUST00000200621 289 ntBASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim43aQ3TL54 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim43aQ3TL54 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43aQ3TL54 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43aQ3TL54 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43aQ3TL54 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43aQ3TL54 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim43aQ3TL54 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms