Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Cd27P41272 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Gm12527-201ENSMUST00000117967 564 ntBASIC14.58□□□□□ -0.08
Cd27P41272 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Cd27P41272 Gm12441-201ENSMUST00000121806 588 ntBASIC14.58□□□□□ -0.08
Cd27P41272 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.58□□□□□ -0.08
Cd27P41272 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Tgds-204ENSMUST00000228543 1594 ntBASIC14.58□□□□□ -0.08
Cd27P41272 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.58□□□□□ -0.08
Cd27P41272 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cd27P41272 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Cd27P41272 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Gm2399-201ENSMUST00000104944 225 ntBASIC14.57□□□□□ -0.08
Cd27P41272 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.57□□□□□ -0.08
Cd27P41272 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.57□□□□□ -0.08
Cd27P41272 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cd27P41272 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.57□□□□□ -0.08
Cd27P41272 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.57□□□□□ -0.08
Cd27P41272 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cd27P41272 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cd27P41272 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.57□□□□□ -0.08
Cd27P41272 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.57□□□□□ -0.08
Cd27P41272 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.57□□□□□ -0.08
Cd27P41272 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cd27P41272 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cd27P41272 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.56□□□□□ -0.08
Cd27P41272 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.56□□□□□ -0.08
Cd27P41272 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.56□□□□□ -0.08
Cd27P41272 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.56□□□□□ -0.08
Cd27P41272 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cd27P41272 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cd27P41272 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cd27P41272 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.55□□□□□ -0.08
Cd27P41272 Gm20049-201ENSMUST00000219950 730 ntBASIC14.55□□□□□ -0.08
Cd27P41272 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cd27P41272 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cd27P41272 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.54□□□□□ -0.08
Cd27P41272 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cd27P41272 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms