Protein–RNA interactions for Protein: P10820

Prf1, Perforin-1, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prf1P10820 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prf1P10820 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prf1P10820 Gm2559-201ENSMUST00000201323 363 ntBASIC18.7■□□□□ 0.58
Prf1P10820 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Prf1P10820 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Prf1P10820 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prf1P10820 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Prf1P10820 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Prf1P10820 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.69■□□□□ 0.58
Prf1P10820 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prf1P10820 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prf1P10820 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prf1P10820 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Prf1P10820 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Prf1P10820 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.69■□□□□ 0.58
Prf1P10820 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prf1P10820 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prf1P10820 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prf1P10820 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prf1P10820 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prf1P10820 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prf1P10820 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prf1P10820 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prf1P10820 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prf1P10820 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.68■□□□□ 0.58
Prf1P10820 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.68■□□□□ 0.58
Prf1P10820 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.68■□□□□ 0.58
Prf1P10820 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prf1P10820 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.68■□□□□ 0.58
Prf1P10820 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.68■□□□□ 0.58
Prf1P10820 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prf1P10820 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.68■□□□□ 0.58
Prf1P10820 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prf1P10820 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prf1P10820 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prf1P10820 Dio3-201ENSMUST00000097228 1449 ntBASIC18.67■□□□□ 0.58
Prf1P10820 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prf1P10820 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prf1P10820 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prf1P10820 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prf1P10820 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Prf1P10820 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.67■□□□□ 0.58
Prf1P10820 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prf1P10820 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Prf1P10820 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.66■□□□□ 0.58
Prf1P10820 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prf1P10820 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Prf1P10820 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prf1P10820 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.66■□□□□ 0.58
Prf1P10820 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prf1P10820 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prf1P10820 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prf1P10820 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prf1P10820 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prf1P10820 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 Flg-201ENSMUST00000050758 1488 ntBASIC18.65■□□□□ 0.58
Prf1P10820 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.65■□□□□ 0.58
Prf1P10820 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.65■□□□□ 0.58
Prf1P10820 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.65■□□□□ 0.58
Prf1P10820 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.65■□□□□ 0.58
Prf1P10820 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.65■□□□□ 0.58
Prf1P10820 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prf1P10820 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.64■□□□□ 0.58
Prf1P10820 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prf1P10820 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prf1P10820 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.64■□□□□ 0.57
Prf1P10820 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prf1P10820 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.64■□□□□ 0.57
Prf1P10820 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Prf1P10820 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prf1P10820 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prf1P10820 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prf1P10820 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prf1P10820 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prf1P10820 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Prf1P10820 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prf1P10820 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Prf1P10820 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Prf1P10820 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prf1P10820 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Prf1P10820 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prf1P10820 Gm11643-201ENSMUST00000119578 864 ntBASIC18.63■□□□□ 0.57
Prf1P10820 Gm38285-201ENSMUST00000192928 922 ntBASIC18.63■□□□□ 0.57
Prf1P10820 Zfp783-201ENSMUST00000095946 670 ntBASIC18.63■□□□□ 0.57
Prf1P10820 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prf1P10820 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prf1P10820 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prf1P10820 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prf1P10820 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms