Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
NclP09405 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NclP09405 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NclP09405 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
NclP09405 Gm715-201ENSMUST00000117865 831 ntBASIC26.96■■□□□ 1.91
NclP09405 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC26.96■■□□□ 1.91
NclP09405 Gm10138-203ENSMUST00000206952 366 ntBASIC26.96■■□□□ 1.91
NclP09405 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NclP09405 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
NclP09405 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NclP09405 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NclP09405 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
NclP09405 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
NclP09405 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
NclP09405 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC26.95■■□□□ 1.91
NclP09405 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC26.95■■□□□ 1.9
NclP09405 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC26.95■■□□□ 1.9
NclP09405 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
NclP09405 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC26.95■■□□□ 1.9
NclP09405 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
NclP09405 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
NclP09405 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
NclP09405 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
NclP09405 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC26.94■■□□□ 1.9
NclP09405 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
NclP09405 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NclP09405 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC26.94■■□□□ 1.9
NclP09405 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NclP09405 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NclP09405 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NclP09405 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NclP09405 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
NclP09405 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NclP09405 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NclP09405 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NclP09405 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NclP09405 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
NclP09405 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
NclP09405 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
NclP09405 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
NclP09405 Mir7071-201ENSMUST00000184847 69 ntBASIC26.93■■□□□ 1.9
NclP09405 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NclP09405 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
NclP09405 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
NclP09405 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NclP09405 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NclP09405 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
NclP09405 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NclP09405 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
NclP09405 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
NclP09405 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NclP09405 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC26.92■■□□□ 1.9
NclP09405 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC26.92■■□□□ 1.9
NclP09405 AL672049.1-201ENSMUST00000197943 91 ntBASIC26.92■■□□□ 1.9
NclP09405 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NclP09405 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
NclP09405 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NclP09405 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
NclP09405 Gm15853-202ENSMUST00000195518 2041 ntBASIC26.91■■□□□ 1.9
NclP09405 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
NclP09405 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC26.91■■□□□ 1.9
NclP09405 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
NclP09405 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC26.91■■□□□ 1.9
NclP09405 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC26.9■■□□□ 1.9
NclP09405 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NclP09405 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NclP09405 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
NclP09405 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
NclP09405 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
NclP09405 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
NclP09405 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC26.9■■□□□ 1.9
NclP09405 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
NclP09405 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NclP09405 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
NclP09405 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NclP09405 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NclP09405 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NclP09405 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC26.89■■□□□ 1.9
NclP09405 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC26.89■■□□□ 1.89
NclP09405 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
NclP09405 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
NclP09405 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
NclP09405 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
NclP09405 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC26.88■■□□□ 1.89
NclP09405 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NclP09405 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NclP09405 Gm15375-201ENSMUST00000119510 849 ntBASIC26.88■■□□□ 1.89
NclP09405 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC26.88■■□□□ 1.89
NclP09405 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
NclP09405 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC26.88■■□□□ 1.89
NclP09405 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC26.88■■□□□ 1.89
NclP09405 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
NclP09405 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
NclP09405 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC26.88■■□□□ 1.89
NclP09405 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
NclP09405 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NclP09405 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NclP09405 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
NclP09405 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NclP09405 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms