Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Gm18666-201ENSMUST00000190039 958 ntBASIC21.48■■□□□ 1.03
Slc4a4O88343 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc4a4O88343 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Slc4a4O88343 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.48■■□□□ 1.03
Slc4a4O88343 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Slc4a4O88343 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.47■■□□□ 1.03
Slc4a4O88343 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.47■■□□□ 1.03
Slc4a4O88343 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.47■■□□□ 1.03
Slc4a4O88343 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc4a4O88343 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Slc4a4O88343 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc4a4O88343 Gm38285-201ENSMUST00000192928 922 ntBASIC21.47■■□□□ 1.03
Slc4a4O88343 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Slc4a4O88343 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.47■■□□□ 1.03
Slc4a4O88343 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Slc4a4O88343 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc4a4O88343 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc4a4O88343 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.46■■□□□ 1.03
Slc4a4O88343 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc4a4O88343 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc4a4O88343 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.46■■□□□ 1.03
Slc4a4O88343 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc4a4O88343 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc4a4O88343 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc4a4O88343 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Slc4a4O88343 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.46■■□□□ 1.03
Slc4a4O88343 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.45■■□□□ 1.03
Slc4a4O88343 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Slc4a4O88343 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Slc4a4O88343 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc4a4O88343 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.45■■□□□ 1.02
Slc4a4O88343 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.45■■□□□ 1.02
Slc4a4O88343 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.45■■□□□ 1.02
Slc4a4O88343 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Slc4a4O88343 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc4a4O88343 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc4a4O88343 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc4a4O88343 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.45■■□□□ 1.02
Slc4a4O88343 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc4a4O88343 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc4a4O88343 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc4a4O88343 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Slc4a4O88343 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc4a4O88343 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.44■■□□□ 1.02
Slc4a4O88343 Gm10812-201ENSMUST00000099864 546 ntBASIC21.44■■□□□ 1.02
Slc4a4O88343 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc4a4O88343 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Slc4a4O88343 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc4a4O88343 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc4a4O88343 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Slc4a4O88343 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc4a4O88343 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc4a4O88343 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc4a4O88343 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc4a4O88343 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.43■■□□□ 1.02
Slc4a4O88343 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.43■■□□□ 1.02
Slc4a4O88343 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.43■■□□□ 1.02
Slc4a4O88343 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc4a4O88343 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc4a4O88343 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.43■■□□□ 1.02
Slc4a4O88343 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc4a4O88343 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc4a4O88343 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Slc4a4O88343 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc4a4O88343 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Slc4a4O88343 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Slc4a4O88343 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc4a4O88343 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
Slc4a4O88343 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc4a4O88343 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc4a4O88343 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc4a4O88343 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc4a4O88343 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc4a4O88343 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc4a4O88343 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Slc4a4O88343 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc4a4O88343 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Slc4a4O88343 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc4a4O88343 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Slc4a4O88343 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Slc4a4O88343 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.41■■□□□ 1.02
Slc4a4O88343 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.41■■□□□ 1.02
Slc4a4O88343 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc4a4O88343 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc4a4O88343 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc4a4O88343 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.41■■□□□ 1.02
Slc4a4O88343 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.41■■□□□ 1.02
Slc4a4O88343 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc4a4O88343 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc4a4O88343 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.4■■□□□ 1.02
Slc4a4O88343 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc4a4O88343 Gm10698-201ENSMUST00000182663 604 ntBASIC21.4■■□□□ 1.02
Slc4a4O88343 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc4a4O88343 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc4a4O88343 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.39■■□□□ 1.02
Slc4a4O88343 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Slc4a4O88343 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Slc4a4O88343 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Slc4a4O88343 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
Slc4a4O88343 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms