Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim63Q38HM4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.17■□□□□ 0.02
Trim63Q38HM4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim63Q38HM4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim63Q38HM4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.16■□□□□ 0.02
Trim63Q38HM4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Gm44428-201ENSMUST00000204474 874 ntBASIC15.16■□□□□ 0.02
Trim63Q38HM4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim63Q38HM4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Trim63Q38HM4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.15■□□□□ 0.02
Trim63Q38HM4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.15■□□□□ 0.02
Trim63Q38HM4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim63Q38HM4 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.15■□□□□ 0.02
Trim63Q38HM4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.14■□□□□ 0.01
Trim63Q38HM4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim63Q38HM4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trim63Q38HM4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.13■□□□□ 0.01
Trim63Q38HM4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms