Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col10a1Q05306 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.82■□□□□ 0.28
Col10a1Q05306 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col10a1Q05306 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col10a1Q05306 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col10a1Q05306 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col10a1Q05306 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col10a1Q05306 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col10a1Q05306 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.81■□□□□ 0.28
Col10a1Q05306 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col10a1Q05306 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col10a1Q05306 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col10a1Q05306 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col10a1Q05306 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col10a1Q05306 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col10a1Q05306 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col10a1Q05306 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Col10a1Q05306 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col10a1Q05306 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col10a1Q05306 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.8■□□□□ 0.28
Col10a1Q05306 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col10a1Q05306 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col10a1Q05306 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.8■□□□□ 0.28
Col10a1Q05306 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col10a1Q05306 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col10a1Q05306 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Col10a1Q05306 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col10a1Q05306 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col10a1Q05306 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col10a1Q05306 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Col10a1Q05306 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.79■□□□□ 0.28
Col10a1Q05306 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.79■□□□□ 0.28
Col10a1Q05306 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Col10a1Q05306 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col10a1Q05306 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col10a1Q05306 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col10a1Q05306 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.79■□□□□ 0.28
Col10a1Q05306 Gm26524-201ENSMUST00000192339 390 ntBASIC16.79■□□□□ 0.28
Col10a1Q05306 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.79■□□□□ 0.28
Col10a1Q05306 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col10a1Q05306 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col10a1Q05306 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col10a1Q05306 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col10a1Q05306 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col10a1Q05306 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.78■□□□□ 0.28
Col10a1Q05306 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
Col10a1Q05306 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col10a1Q05306 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.78■□□□□ 0.28
Col10a1Q05306 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col10a1Q05306 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.78■□□□□ 0.28
Col10a1Q05306 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Col10a1Q05306 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col10a1Q05306 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col10a1Q05306 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col10a1Q05306 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col10a1Q05306 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col10a1Q05306 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col10a1Q05306 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col10a1Q05306 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.78■□□□□ 0.28
Col10a1Q05306 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Col10a1Q05306 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Col10a1Q05306 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col10a1Q05306 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col10a1Q05306 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col10a1Q05306 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Col10a1Q05306 Rab3c-203ENSMUST00000224180 967 ntBASIC16.77■□□□□ 0.28
Col10a1Q05306 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col10a1Q05306 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col10a1Q05306 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
Col10a1Q05306 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col10a1Q05306 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col10a1Q05306 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Col10a1Q05306 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.77■□□□□ 0.27
Col10a1Q05306 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col10a1Q05306 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Col10a1Q05306 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col10a1Q05306 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Col10a1Q05306 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Col10a1Q05306 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 Gm22325-201ENSMUST00000158904 308 ntBASIC16.76■□□□□ 0.27
Col10a1Q05306 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.76■□□□□ 0.27
Col10a1Q05306 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.76■□□□□ 0.27
Col10a1Q05306 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.76■□□□□ 0.27
Col10a1Q05306 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Col10a1Q05306 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col10a1Q05306 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col10a1Q05306 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.75■□□□□ 0.27
Col10a1Q05306 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms