Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.57■□□□□ 0.56
Thumpd3P97770 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd3P97770 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd3P97770 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.56■□□□□ 0.56
Thumpd3P97770 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd3P97770 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd3P97770 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd3P97770 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Thumpd3P97770 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd3P97770 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd3P97770 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.56■□□□□ 0.56
Thumpd3P97770 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.56■□□□□ 0.56
Thumpd3P97770 Gm37179-201ENSMUST00000194862 823 ntBASIC18.56■□□□□ 0.56
Thumpd3P97770 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Thumpd3P97770 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd3P97770 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.56■□□□□ 0.56
Thumpd3P97770 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd3P97770 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd3P97770 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd3P97770 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd3P97770 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd3P97770 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.55■□□□□ 0.56
Thumpd3P97770 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd3P97770 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd3P97770 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Thumpd3P97770 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd3P97770 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd3P97770 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd3P97770 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd3P97770 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd3P97770 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd3P97770 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Thumpd3P97770 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Thumpd3P97770 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd3P97770 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd3P97770 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd3P97770 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Thumpd3P97770 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd3P97770 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd3P97770 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.54■□□□□ 0.56
Thumpd3P97770 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd3P97770 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd3P97770 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd3P97770 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd3P97770 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd3P97770 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd3P97770 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.54■□□□□ 0.56
Thumpd3P97770 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.53■□□□□ 0.56
Thumpd3P97770 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd3P97770 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.52■□□□□ 0.56
Thumpd3P97770 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd3P97770 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd3P97770 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd3P97770 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd3P97770 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.52■□□□□ 0.56
Thumpd3P97770 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd3P97770 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd3P97770 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.52■□□□□ 0.56
Thumpd3P97770 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.52■□□□□ 0.56
Thumpd3P97770 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd3P97770 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Thumpd3P97770 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Thumpd3P97770 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Thumpd3P97770 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Thumpd3P97770 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.51■□□□□ 0.55
Thumpd3P97770 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.51■□□□□ 0.55
Thumpd3P97770 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Thumpd3P97770 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Thumpd3P97770 Gm27801-201ENSMUST00000184174 223 ntBASIC18.51■□□□□ 0.55
Thumpd3P97770 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 235.1 ms