Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1aP97445 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.83■□□□□ 0.28
Cacna1aP97445 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1aP97445 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1aP97445 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cacna1aP97445 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cacna1aP97445 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1aP97445 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1aP97445 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1aP97445 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cacna1aP97445 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1aP97445 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1aP97445 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1aP97445 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.82■□□□□ 0.28
Cacna1aP97445 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cacna1aP97445 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cacna1aP97445 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.81■□□□□ 0.28
Cacna1aP97445 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1aP97445 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cacna1aP97445 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1aP97445 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cacna1aP97445 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1aP97445 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cacna1aP97445 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1aP97445 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1aP97445 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1aP97445 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1aP97445 Gm37292-201ENSMUST00000192062 758 ntBASIC16.81■□□□□ 0.28
Cacna1aP97445 Gm18032-201ENSMUST00000222541 538 ntBASIC16.81■□□□□ 0.28
Cacna1aP97445 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cacna1aP97445 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1aP97445 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cacna1aP97445 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cacna1aP97445 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1aP97445 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.8■□□□□ 0.28
Cacna1aP97445 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.8■□□□□ 0.28
Cacna1aP97445 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1aP97445 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1aP97445 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1aP97445 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1aP97445 Gm10138-203ENSMUST00000206952 366 ntBASIC16.8■□□□□ 0.28
Cacna1aP97445 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.8■□□□□ 0.28
Cacna1aP97445 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1aP97445 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1aP97445 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cacna1aP97445 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1aP97445 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.8■□□□□ 0.28
Cacna1aP97445 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cacna1aP97445 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1aP97445 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.79■□□□□ 0.28
Cacna1aP97445 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1aP97445 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1aP97445 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1aP97445 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1aP97445 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1aP97445 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.79■□□□□ 0.28
Cacna1aP97445 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Cacna1aP97445 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cacna1aP97445 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cacna1aP97445 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cacna1aP97445 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1aP97445 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1aP97445 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.78■□□□□ 0.28
Cacna1aP97445 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1aP97445 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1aP97445 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1aP97445 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.78■□□□□ 0.28
Cacna1aP97445 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1aP97445 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.78■□□□□ 0.28
Cacna1aP97445 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cacna1aP97445 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1aP97445 Gm14859-201ENSMUST00000117752 357 ntBASIC16.78■□□□□ 0.28
Cacna1aP97445 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1aP97445 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1aP97445 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1aP97445 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Cacna1aP97445 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1aP97445 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1aP97445 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1aP97445 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.77■□□□□ 0.28
Cacna1aP97445 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1aP97445 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1aP97445 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1aP97445 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1aP97445 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.77■□□□□ 0.27
Cacna1aP97445 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1aP97445 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Cacna1aP97445 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1aP97445 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1aP97445 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1aP97445 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1aP97445 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1aP97445 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1aP97445 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cacna1aP97445 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1aP97445 AA414768-201ENSMUST00000121924 1257 ntBASIC16.76■□□□□ 0.27
Cacna1aP97445 Gm12382-201ENSMUST00000122005 922 ntBASIC16.76■□□□□ 0.27
Cacna1aP97445 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cacna1aP97445 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cacna1aP97445 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms